DeepSight

发布于 2023-09-28  212 次阅读


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安装

source:https://pypi.org/project/deepinsight/

在管理员权限下打开cmd,激活conda环境后直接安装git上的包,不建议安装pypi上的pip install,内置文件没有随之更新(pip uninstall pyDeepInsight)

conda.bat activate C:\Users\AQ84510\AppData\Local\anaconda3
pip install git+https://github.com/alok-ai-lab/pyDeepInsight.git#egg=pyDeepInsight

检查安装文件夹内的文件是否和git上一致

C:\Users\AQ84510\AppData\Local\anaconda3\Lib\site-packages\pyDeepInsight

下载测试数据集

import gdown 
data2='https://drive.google.com/uc?export=download&id=1SYQ5Cg7zgIWKvLK5ZxzIVqZH5rG9PqPV'
output2='H://curatedTCGAData_RNASeq2GeneNorm-20160128.txt.gz'
gdown.download(data2, output2, quiet=False)


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最后更新于 2024-01-23